SNP-based QTL mapping for panicle traits in the japonica sup
发布时间:2021-04-18 23:01
Panicle traits directly associated with yield are a target of selection in rice breeding.Although abundant QTL for panicle traits have been identified, there is little information about the genetic basis of panicle traits in japonica super rice(JSR) cultivars. In this study,we identified QTL for panicle traits in three environments using a population of recombinant inbred lines(RILs) derived from the JSR cultivar Liaoxing 1. A total of 197 RILs were genotyped with 285 polymorphic SNP markers. Ph...
【文章来源】:The Crop Journal. 2020,8(05)SCICSCD
【文章页数】:12 页
【文章目录】:
1. Introduction
2. Materials and methods
2.1. Plant materials
2.2. Experimental design and trait measurement
2.3. Statistical analysis of phenotypic data
2.4. Genotyping
2.5. Linkage mapping and QTL analysis
3. Results
3.1. Phenotypic analysis
3.2. Genetic linkage map
3.3. QTL analysis of panicle traits in individual environments and their BLUP values
3.4. Joint analysis of panicle traits in multiple environments
3.5. Pyramiding effect of QTL on GN
4. Discussion
4.1. Phenotypic variation of panicle traits
4.2. QTL analysis in single and multiple environments
4.3. Novel QTL for panicle traits and their application in rice breeding for high yield potential
5. Conclusions
【参考文献】:
期刊论文
[1]Ordering of high-density markers by the k-Optimal algorithm for the traveling-salesman problem[J]. Luyan Zhang,Huihui Li,Lei Meng,Jiankang Wang. The Crop Journal. 2020(05)
[2]Genetic mapping of QTL for agronomic traits and grain mineral elements in rice[J]. Gwen Iris Descalsota-Empleo,Amery Amparado,Mary Ann Inabangan-Asilo,Frances Tesoro,James Stangoulis,Russell Reinke,B.P.Mallikarjuna Swamy. The Crop Journal. 2019(04)
[3]QTL mapping and QTL × environment interaction analysis of multi-seed pod in cultivated peanut(Arachis hypogaea L.)[J]. Liang Wang,Xinlei Yang,Shunli Cui,Guojun Mu,Xingming Sun,Lifeng Liu,Zichao Li. The Crop Journal. 2019(02)
[4]Comparative study of estimation methods for genomic breeding values[J]. Chonglong Wang,Qin Zhang,Li Jiang,Rong Qian,Xiangdong Ding,Yaofeng Zhao. Science Bulletin. 2016(05)
[5]QTL IciMapping:Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations[J]. Lei Meng,Huihui Li,Luyan Zhang,Jiankang Wang. The Crop Journal. 2015(03)
[6]利用重组自交系群体检测水稻条纹叶枯病抗性基因及QTL分析[J]. 丁秀兰,江玲,刘世家,王春明,陈亮明,程兆榜,范永坚,周益军,万建民. 遗传学报. 2004(03)
本文编号:3146325
【文章来源】:The Crop Journal. 2020,8(05)SCICSCD
【文章页数】:12 页
【文章目录】:
1. Introduction
2. Materials and methods
2.1. Plant materials
2.2. Experimental design and trait measurement
2.3. Statistical analysis of phenotypic data
2.4. Genotyping
2.5. Linkage mapping and QTL analysis
3. Results
3.1. Phenotypic analysis
3.2. Genetic linkage map
3.3. QTL analysis of panicle traits in individual environments and their BLUP values
3.4. Joint analysis of panicle traits in multiple environments
3.5. Pyramiding effect of QTL on GN
4. Discussion
4.1. Phenotypic variation of panicle traits
4.2. QTL analysis in single and multiple environments
4.3. Novel QTL for panicle traits and their application in rice breeding for high yield potential
5. Conclusions
【参考文献】:
期刊论文
[1]Ordering of high-density markers by the k-Optimal algorithm for the traveling-salesman problem[J]. Luyan Zhang,Huihui Li,Lei Meng,Jiankang Wang. The Crop Journal. 2020(05)
[2]Genetic mapping of QTL for agronomic traits and grain mineral elements in rice[J]. Gwen Iris Descalsota-Empleo,Amery Amparado,Mary Ann Inabangan-Asilo,Frances Tesoro,James Stangoulis,Russell Reinke,B.P.Mallikarjuna Swamy. The Crop Journal. 2019(04)
[3]QTL mapping and QTL × environment interaction analysis of multi-seed pod in cultivated peanut(Arachis hypogaea L.)[J]. Liang Wang,Xinlei Yang,Shunli Cui,Guojun Mu,Xingming Sun,Lifeng Liu,Zichao Li. The Crop Journal. 2019(02)
[4]Comparative study of estimation methods for genomic breeding values[J]. Chonglong Wang,Qin Zhang,Li Jiang,Rong Qian,Xiangdong Ding,Yaofeng Zhao. Science Bulletin. 2016(05)
[5]QTL IciMapping:Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations[J]. Lei Meng,Huihui Li,Luyan Zhang,Jiankang Wang. The Crop Journal. 2015(03)
[6]利用重组自交系群体检测水稻条纹叶枯病抗性基因及QTL分析[J]. 丁秀兰,江玲,刘世家,王春明,陈亮明,程兆榜,范永坚,周益军,万建民. 遗传学报. 2004(03)
本文编号:3146325
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